software
PAFit package
An R package for estimating preferential attachment and fitnesses in growing complex networks. This package implements the methods proposed in these papers. You can find it on GitHub or CRAN.
For installation:
Multivariate Counterfactual Distribution with Optimal Transport
Python code for estimating the multivariate counterfactual distribution by robust optimal transport methods. You can find it on GitHub.
FoFaF package
An R package, developed mainly by Masaaki Inoue, for estimating friends-of-friends effect in temporal networks. You can find it on GitHub.
For installation: